From 2797b451fbafb61b0c232fecb8e941254febf93d Mon Sep 17 00:00:00 2001
From: Alexander Rose <alexander.rose@weirdbyte.de>
Date: Fri, 22 May 2020 17:10:03 -0700
Subject: [PATCH] add interesting pdb entries info

---
 docs/interesting-pdb-entries.md | 22 ++++++++++++++++++++++
 1 file changed, 22 insertions(+)
 create mode 100644 docs/interesting-pdb-entries.md

diff --git a/docs/interesting-pdb-entries.md b/docs/interesting-pdb-entries.md
new file mode 100644
index 000000000..64c526544
--- /dev/null
+++ b/docs/interesting-pdb-entries.md
@@ -0,0 +1,22 @@
+* Cyclic polymers (1sfi, 6dny, 1HVZ)
+* B-DNA (1bna)
+* Missing carbonyl oxygen (1gfl)
+* Mono-saccharides with alt locs (1B5F)
+* Microheterogeneity (1EJG, 3NIR)
+* PNA: peptide nucleic acid (5eme, 1xj9)
+* Peptide derived residues
+    * GFP chromophores (5Z6Y)
+* Nucleotides that don’t have a parent base set, i.e. detect purine/pyrimidine from geometry (THX in 1AUL, OMC in e.g. 5D3G)
+* Bases with modified ring atoms
+    * DZ has C1 instead of N1 (e.g. 5I4N)
+    * DP has N5 instead of C5 and C7 instead of N7 (e.g. 5I4N)
+* Beta & Gamma peptides (e.g. 1GAC, 6PQF)
+* Mixed (heterogeneous) all-atom/trace-only RNA model (1JGQ)
+* Polymers with residues with missing trace atoms (e.g. 2QFJ)
+* Modified RNA bases (1y26, 5L4O)
+* Discontinuous chains, i.e. gaps in the sequence (3sn6)
+* Lots of sheets (1cbs)
+* DNA (2np2, 1d66)
+* C-alpha only (2rcj)
+* Not cyclic, but termini are backbone-only and within distance but seqIds are not compatible (6SW3)
+* Close backbone atoms but not linked (e.g. 4HIV)
\ No newline at end of file
-- 
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