From 78c7664be346ed014acf50d4ae7047abdde9819d Mon Sep 17 00:00:00 2001
From: Alexander Rose <alexander.rose@weirdbyte.de>
Date: Sun, 12 Jan 2020 13:38:06 -0800
Subject: [PATCH] very basic ccp4 spec test
---
src/mol-io/reader/_spec/ccp4.spec.ts | 32 ++++++++++++++++++++++------
src/mol-io/reader/_spec/dcd.spec.ts | 1 -
2 files changed, 25 insertions(+), 8 deletions(-)
diff --git a/src/mol-io/reader/_spec/ccp4.spec.ts b/src/mol-io/reader/_spec/ccp4.spec.ts
index 1fe2202d9..7cd890b2a 100644
--- a/src/mol-io/reader/_spec/ccp4.spec.ts
+++ b/src/mol-io/reader/_spec/ccp4.spec.ts
@@ -6,19 +6,37 @@
import * as CCP4 from '../ccp4/parser'
-const ccp4Buffer = new Uint8Array(4 * 64)
+function createCcp4Data() {
+ const data = new Uint8Array(4 * 256 + 6)
+
+ const dv = new DataView(data.buffer)
+
+ dv.setInt8(52 * 4, 'M'.charCodeAt(0))
+ dv.setInt8(52 * 4 + 1, 'A'.charCodeAt(0))
+ dv.setInt8(52 * 4 + 2, 'P'.charCodeAt(0))
+ dv.setInt8(52 * 4 + 3, ' '.charCodeAt(0))
+
+ dv.setInt32(0 * 4, 1) // NC
+ dv.setInt32(1 * 4, 2) // NR
+ dv.setInt32(2 * 4, 3) // NS
+
+ return data
+}
describe('ccp4 reader', () => {
it('basic', async () => {
- const parsed = await CCP4.parse(ccp4Buffer).run();
+ const data = createCcp4Data()
+ const parsed = await CCP4.parse(data).run();
if (parsed.isError) {
- console.log(parsed)
- return;
+ throw new Error(parsed.message)
}
- // const ccp4File = parsed.result;
- // const { header, values } = ccp4File;
- // TODO
+ const ccp4File = parsed.result;
+ const { header } = ccp4File;
+
+ expect(header.NC).toBe(1)
+ expect(header.NR).toBe(2)
+ expect(header.NS).toBe(3)
});
});
diff --git a/src/mol-io/reader/_spec/dcd.spec.ts b/src/mol-io/reader/_spec/dcd.spec.ts
index d047e61b5..ffb3393d7 100644
--- a/src/mol-io/reader/_spec/dcd.spec.ts
+++ b/src/mol-io/reader/_spec/dcd.spec.ts
@@ -10,7 +10,6 @@ function createDcdData() {
const data = new Uint8Array(4 * 128)
const dv = new DataView(data.buffer)
- // const intView = new Int32Array(data.buffer, 0, 23)
// set little endian
dv.setInt32(0, 84)
--
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