From e36d483f95a89b6f755ec2f464e1373d6899b1a1 Mon Sep 17 00:00:00 2001
From: David Sehnal <david.sehnal@gmail.com>
Date: Thu, 11 Oct 2018 15:15:23 +0200
Subject: [PATCH] model-server: added residueSurroundings query
---
src/servers/model/server/api.ts | 10 ++++++++++
1 file changed, 10 insertions(+)
diff --git a/src/servers/model/server/api.ts b/src/servers/model/server/api.ts
index ac0e7147c..7744f3489 100644
--- a/src/servers/model/server/api.ts
+++ b/src/servers/model/server/api.ts
@@ -126,6 +126,16 @@ const QueryMap = {
},
params: [ AtomSiteTestParams, RadiusParam ]
}),
+ 'residueSurroundings': Q<{ atom_site: AtomSiteSchema, radius: number }>({
+ niceName: 'Residue Surroundings',
+ description: 'Identifies all residues within the given radius from the source residue.',
+ query(p) {
+ const tests = getAtomsTests(p.atom_site);
+ const center = Queries.combinators.merge(tests.map(test => Queries.generators.atoms(test)));
+ return Queries.modifiers.includeSurroundings(center, { radius: p.radius, wholeResidues: true });
+ },
+ params: [ AtomSiteTestParams, RadiusParam ]
+ })
};
export type QueryName = keyof typeof QueryMap
--
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