Renamed mol-view mol-canvas3d, moved parameters.ts to mol-util, added mol-plugin

src/mol-view/util.ts → src/mol-canvas3d/util.ts

@@ -4,31 +4,6 @@
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
  */
 
-import CIF from 'mol-io/reader/cif'
-import { Progress } from 'mol-task'
-import { VolumeData, parseDensityServerData } from 'mol-model/volume'
-import { DensityServer_Data_Database } from 'mol-io/reader/cif/schema/density-server';
-
-export async function downloadCif(url: string, isBinary: boolean) {
-    const data = await fetch(url);
-    return parseCif(isBinary ? new Uint8Array(await data.arrayBuffer()) : await data.text());
-}
-
-export async function parseCif(data: string|Uint8Array) {
-    const comp = CIF.parse(data)
-    const parsed = await comp.run(Progress.format);
-    if (parsed.isError) throw parsed;
-    return parsed.result
-}
-
-export type Volume = { source: DensityServer_Data_Database, volume: VolumeData }
-
-export async function getVolumeFromEmdId(emdid: string): Promise<Volume> {
-    const cif = await downloadCif(`https://webchem.ncbr.muni.cz/DensityServer/em/emd-${emdid}/cell?detail=4`, true)
-    const data = CIF.schema.densityServer(cif.blocks[1])
-    return { source: data, volume: await parseDensityServerData(data).run() }
-}
-
 export function resizeCanvas (canvas: HTMLCanvasElement, container: Element) {
     let w = window.innerWidth
     let h = window.innerHeight