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Michal Malý
Molstar
Commits
6a7268a9
Commit
6a7268a9
authored
5 years ago
by
Alexander Rose
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improved sequenceNumberPeriod for short sequences
parent
eea1137a
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1 changed file
src/mol-plugin/ui/sequence/sequence.tsx
+18
-9
18 additions, 9 deletions
src/mol-plugin/ui/sequence/sequence.tsx
with
18 additions
and
9 deletions
src/mol-plugin/ui/sequence/sequence.tsx
+
18
−
9
View file @
6a7268a9
...
...
@@ -42,9 +42,13 @@ export class Sequence<P extends SequenceProps> extends PluginUIComponent<P> {
}
private
get
sequenceNumberPeriod
()
{
return
this
.
props
.
sequenceNumberPeriod
!==
undefined
?
this
.
props
.
sequenceNumberPeriod
as
number
:
(
this
.
props
.
sequenceWrapper
.
length
>
10
?
10
:
1
)
if
(
this
.
props
.
sequenceNumberPeriod
!==
undefined
)
{
return
this
.
props
.
sequenceNumberPeriod
as
number
}
if
(
this
.
props
.
sequenceWrapper
.
length
>
10
)
return
10
const
lastSeqNum
=
this
.
getSequenceNumber
(
this
.
props
.
sequenceWrapper
.
length
-
1
)
if
(
lastSeqNum
.
length
>
1
)
return
5
return
1
}
componentDidMount
()
{
...
...
@@ -127,11 +131,7 @@ export class Sequence<P extends SequenceProps> extends PluginUIComponent<P> {
}
private
location
=
StructureElement
.
Location
.
create
();
private
padSeqNum
(
n
:
string
)
{
if
(
n
.
length
<
MaxSequenceNumberSize
)
return
n
+
new
Array
(
MaxSequenceNumberSize
-
n
.
length
+
1
).
join
(
'
\
u00A0
'
);
return
n
;
}
private
getSequenceNumber
(
seqIdx
:
number
,
label
:
string
)
{
private
getSequenceNumber
(
seqIdx
:
number
)
{
let
seqNum
=
''
const
loci
=
this
.
props
.
sequenceWrapper
.
getLoci
(
seqIdx
)
const
l
=
StructureElement
.
Loci
.
getFirstLocation
(
loci
,
this
.
location
);
...
...
@@ -144,6 +144,15 @@ export class Sequence<P extends SequenceProps> extends PluginUIComponent<P> {
seqNum
=
`
${
seqIdx
+
1
}
`
}
}
return
seqNum
}
private
padSeqNum
(
n
:
string
)
{
if
(
n
.
length
<
MaxSequenceNumberSize
)
return
n
+
new
Array
(
MaxSequenceNumberSize
-
n
.
length
+
1
).
join
(
'
\
u00A0
'
);
return
n
;
}
private
getSequenceNumberSpan
(
seqIdx
:
number
,
label
:
string
)
{
const
seqNum
=
this
.
getSequenceNumber
(
seqIdx
)
return
<
span
key
=
{
`marker-
${
seqIdx
}
`
}
className
=
{
this
.
getSequenceNumberClass
(
seqIdx
,
seqNum
,
label
)
}
>
{
this
.
padSeqNum
(
seqNum
)
}
</
span
>
}
...
...
@@ -217,7 +226,7 @@ export class Sequence<P extends SequenceProps> extends PluginUIComponent<P> {
const
label
=
sw
.
residueLabel
(
i
)
// add sequence number before name so the html element do not get separated by a line-break
if
(
hasNumbers
&&
i
%
period
===
0
&&
i
<
il
)
{
elems
[
elems
.
length
]
=
this
.
getSequenceNumber
(
i
,
label
)
elems
[
elems
.
length
]
=
this
.
getSequenceNumber
Span
(
i
,
label
)
}
elems
[
elems
.
length
]
=
this
.
residue
(
i
,
label
,
sw
.
markerArray
[
i
],
sw
.
residueColor
(
i
));
}
...
...
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