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Michal Malý
Molstar
Commits
cd30caa1
Commit
cd30caa1
authored
5 years ago
by
Alexander Rose
Browse files
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Plain Diff
better align negative sequence numbers in ui
parent
41bc74e5
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Changes
2
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2 changed files
src/mol-plugin/skin/base/components/sequence.scss
+8
-0
8 additions, 0 deletions
src/mol-plugin/skin/base/components/sequence.scss
src/mol-plugin/ui/sequence/sequence.tsx
+13
-8
13 additions, 8 deletions
src/mol-plugin/ui/sequence/sequence.tsx
with
21 additions
and
8 deletions
src/mol-plugin/skin/base/components/sequence.scss
+
8
−
0
View file @
cd30caa1
...
...
@@ -56,4 +56,12 @@
.msp-sequence-number-long
{
left
:
3
.3em
;
}
.msp-sequence-number-long-negative
{
left
:
2
.7em
;
}
.msp-sequence-number-negative
{
left
:
2
.5em
;
}
}
\ No newline at end of file
This diff is collapsed.
Click to expand it.
src/mol-plugin/ui/sequence/sequence.tsx
+
13
−
8
View file @
cd30caa1
...
...
@@ -115,10 +115,15 @@ export class Sequence<P extends SequenceProps> extends PluginUIComponent<P> {
return
<
span
key
=
{
seqIdx
}
data-seqid
=
{
seqIdx
}
style
=
{
{
color
:
Color
.
toStyle
(
color
),
backgroundColor
:
this
.
getBackgroundColor
(
marker
)
}
}
className
=
{
this
.
getResidueClass
(
seqIdx
,
label
)
}
>
{
label
}
</
span
>;
}
private
getSequenceNumberClass
(
seqIdx
:
number
,
label
:
string
)
{
return
label
.
length
>
1
&&
seqIdx
>
0
?
'
msp-sequence-number msp-sequence-number-long
'
:
'
msp-sequence-number
'
private
getSequenceNumberClass
(
seqIdx
:
number
,
seqNum
:
string
,
label
:
string
)
{
const
classList
=
[
'
msp-sequence-number
'
]
if
(
seqNum
.
startsWith
(
'
-
'
))
{
if
(
label
.
length
>
1
&&
seqIdx
>
0
)
classList
.
push
(
'
msp-sequence-number-long-negative
'
)
else
classList
.
push
(
'
msp-sequence-number-negative
'
)
}
else
{
if
(
label
.
length
>
1
&&
seqIdx
>
0
)
classList
.
push
(
'
msp-sequence-number-long
'
)
}
return
classList
.
join
(
'
'
)
}
private
location
=
StructureElement
.
Location
.
create
();
...
...
@@ -127,19 +132,19 @@ export class Sequence<P extends SequenceProps> extends PluginUIComponent<P> {
return
n
;
}
private
getSequenceNumber
(
seqIdx
:
number
,
label
:
string
)
{
let
seq
uenceNumber
=
''
let
seq
Num
=
''
const
loci
=
this
.
props
.
sequenceWrapper
.
getLoci
(
seqIdx
)
const
l
=
StructureElement
.
Loci
.
getFirstLocation
(
loci
,
this
.
location
);
if
(
l
)
{
if
(
Unit
.
isAtomic
(
l
.
unit
))
{
const
seqId
=
StructureProperties
.
residue
.
auth_seq_id
(
l
)
const
insCode
=
StructureProperties
.
residue
.
pdbx_PDB_ins_code
(
l
)
seq
uenceNumber
=
`
${
seqId
}${
insCode
?
insCode
:
''
}
`
seq
Num
=
`
${
seqId
}${
insCode
?
insCode
:
''
}
`
}
else
if
(
Unit
.
isCoarse
(
l
.
unit
))
{
seq
uenceNumber
=
`
${
seqIdx
+
1
}
`
seq
Num
=
`
${
seqIdx
+
1
}
`
}
}
return
<
span
key
=
{
`marker-
${
seqIdx
}
`
}
className
=
{
this
.
getSequenceNumberClass
(
seqIdx
,
label
)
}
>
{
this
.
padSeqNum
(
seq
uenceNumber
)
}
</
span
>
return
<
span
key
=
{
`marker-
${
seqIdx
}
`
}
className
=
{
this
.
getSequenceNumberClass
(
seqIdx
,
seqNum
,
label
)
}
>
{
this
.
padSeqNum
(
seq
Num
)
}
</
span
>
}
private
updateMarker
()
{
...
...
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