fixed geometry bounding sphere update

src/mol-geo/geometry/direct-volume/direct-volume.ts

src/mol-geo/geometry/lines/lines.ts

src/mol-geo/geometry/mesh/mesh.ts

src/mol-geo/geometry/points/points.ts

src/mol-gl/scene.ts

src/mol-plugin/state.ts

src/mol-repr/structure/complex-visual.ts

src/mol-repr/structure/units-visual.ts

src/mol-repr/volume/representation.ts