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Commit 9074d539 authored by Alexander Rose's avatar Alexander Rose
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add support for sequence numbers in coarse units

parent 91027459
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......@@ -11,7 +11,7 @@ import { Interactivity } from '../../util/interactivity';
import { MarkerAction } from '../../../mol-util/marker-action';
import { ButtonsType, ModifiersKeys, getButtons, getModifiers } from '../../../mol-util/input/input-observer';
import { SequenceWrapper } from './wrapper';
import { StructureElement, StructureProperties } from '../../../mol-model/structure';
import { StructureElement, StructureProperties, Unit } from '../../../mol-model/structure';
import { Subject } from 'rxjs';
import { debounceTime } from 'rxjs/operators';
import { Color } from '../../../mol-util/color';
......@@ -131,9 +131,13 @@ export class Sequence<P extends SequenceProps> extends PluginUIComponent<P> {
const loci = this.props.sequenceWrapper.getLoci(seqIdx)
const l = StructureElement.Loci.getFirstLocation(loci, this.location);
if (l) {
const seqId = StructureProperties.residue.auth_seq_id(l)
const insCode = StructureProperties.residue.pdbx_PDB_ins_code(l)
sequenceNumber = `${seqId}${insCode ? insCode : ''}`
if (Unit.isAtomic(l.unit)) {
const seqId = StructureProperties.residue.auth_seq_id(l)
const insCode = StructureProperties.residue.pdbx_PDB_ins_code(l)
sequenceNumber = `${seqId}${insCode ? insCode : ''}`
} else if (Unit.isCoarse(l.unit)) {
sequenceNumber = `${seqIdx + 1}`
}
}
return <span key={`marker-${seqIdx}`} className={this.getSequenceNumberClass(seqIdx, label)}>{this.padSeqNum(sequenceNumber)}</span>
}
......
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