Skip to content
Snippets Groups Projects
  1. Dec 19, 2022
    • David Sehnal's avatar
      0bf32148
    • David Sehnal's avatar
      Volseg extenison tweaks (#671) · 97d158b6
      David Sehnal authored
      * improve currentVolume behavior
      
      * use different iso-value if 1sigma isnt present in the data
      97d158b6
    • Alexander Rose's avatar
      b772dea1
    • Alexander Rose's avatar
      changelog · 5c8f0b35
      Alexander Rose authored
      5c8f0b35
    • dsehnal's avatar
      add volume controls to Volseg extension · 1b382653
      dsehnal authored
      1b382653
    • midlik's avatar
      Volumes & Segmentations extension (#668) · c7cee63c
      midlik authored
      * Created CellStar state action
      
      * CellStar: download metadata
      
      * Right panel - CellStar UI
      
      * CellStar: Lattice segmenatation and fitted PDB models
      
      * CellStar: Support for source-database entry ID from metadata
      
      * CellStar: Mesh segmentation
      
      * CellStar: Switching between multiple entries
      
      * CellStar: Changed default API URL
      
      * UI updates
      
      * CellStar: Clicking on meshes shows annotations...
      
      * support info in Converted param
      
      * support color/size in VolumeRepresentation3DHelpers.getDefaultParams
      
      * support multi-visual volume representations
      
      - repr can provide list of keys
      - create visual for each key
      
      * add volume segmentation support
      
      - segmentation property
      - segment loci & location
      
      * add volume-segment color theme
      
      * add volume segment representation
      
      * use optional chaining
      
      * add support for volume segmentation cif
      
      * improve isosurface bounding-sphere
      
      * fix segcif schema type
      
      * CellStar: Highlighting segments on hover in the right panel
      
      * CellStar: Using new Mol*-native segment visualization
      
      * lint
      
      * Segmentation volume can have custom segment labels
      
      * CellStar: Segment labels for Mol*-native segments
      
      * CellStar: Removed old implementation of segments
      
      * CellStar: Rename CellStarLatticeSegmentationData2 -> CellStarLatticeSegmentationData
      
      * CellStar: Default volume server is https://cellstar.ncbr.muni.cz
      
      
      
      * CellStar: debugging
      
      * CellStar: Fixed bug in LatticeSegmentation (scaling)
      
      * CellStar: Partially savable state
      
      * CellStar: WaitingSlider
      
      * CellStar: Opacity changed via params
      
      * Savable state for opacity
      
      * CellStar: Changing UI in animations
      
      * CellStar: Savable state for whole current UI
      
      * CellStar: Savable state for segment labels
      
      * CellStar: Source can be 'idr', CellStarVolumeServerConfig.DefaultServer
      
      * CellStar: Select segment for lattice segmentation
      
      * CellStar: Select segment, complete
      
      * CellStar: Changes visible labels to "Volume & Segmentation"
      
      * CellStar: Drop list with available entries
      
      * CellStar: Volume type switching (partial)
      
      * CellStar: Trying to set direct-volume control points
      
      * CellStar: Volume visual switching
      
      * Mesh extension: removed molstar-lib-imports
      
      * CellStar: Global options
      
      * CellStar: Updated file headers and `CHANGELOG.md`
      
      * CellStar: UI controls disabled while executing change
      
      * CellStar: Hidden state nodes, fixed bug with removed global state
      
      * CellStar: Volume opacity slider
      
      * CellStar extension renamed to Volseg
      
      * UI tweaks
      
      Co-authored-by: default avatarAlexander Rose <alexander.rose@weirdbyte.de>
      c7cee63c
  2. Dec 17, 2022
  3. Dec 16, 2022
  4. Dec 15, 2022
  5. Dec 14, 2022
  6. Dec 13, 2022
  7. Dec 12, 2022
  8. Dec 11, 2022
  9. Dec 08, 2022
Loading